Background and Objective: The mechanisms that drive gyrification of the cerebral cortex remain largely elusive. Recent theories have focused on the cortical plate (CP) as a key region involved in gyrification. Here, we sought to identify cellular and/or genetic changes occurring in the CP below gyri and sulci in a gyrencephalic brain during gyrification.
Methods: Using laser capture microdissection, we obtained cells from the CP below a gyrus and a sulcus in the gyrencephalic fetal sheep brain during gyrification (gestational age, (GA) 90; term ~ 147 GA). We then used RNA-Seq to determine differentially expressed genes, and MRI-derived Neurite Orientation Dispersion and Density Imaging (NODDI) to identify microstructural differences between gyri and sulci at GA 98. We validated a subset of differentially expressed genes before (GA 70), during (GA 90), and after gyrification (GA 110) using immunohistochemistry and fluorescent in situ hybridization between gyri and sulci. Cell density (DAPI-positive nuclei per area) and neurite outgrowth (MAP2 immunoreactivity) were also assessed in the CP of gyri and sulci during gyrification.
Key findings: BDNF (p<0.0001), CDK5 (p<0.0001) and NeuroD6 immunoreactivity (p<0.001) were higher, and HDAC5 (p<0.01) and MeCP2 mRNA expression (p<0.001) were lower in gyri vs sulci during gyrification, but not before. Only BDNF remained differentially regulated after gyrification. Also, during gyrification cellular density was lower (p<0.05), while MAP2-immunoreactivity was higher. MRI and NODDI parameters (e.g. FA, MD, fin) also suggested increased neurite outgrowth and lowered density in gyri compared to sulci during gyrification.
Conclusion: These results demonstrate differential gene expression between gyri and sulci in the CP during gyrification. MAP2-immunoreactivity and lower total cell density in gyri vs sulci during gyrification are also consistent with NODDI parameters. Thus, our results suggest neurite outgrowth may be a fundamental mechanism that drives the process of gyrification.